Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_3549Hypothetical protein. (39 aa)    
Predicted Functional Partners:
Tpau_3550
methylated-DNA/protein- cysteinemethyltransferase; KEGG: kra:Krad_2866 methylated-DNA--protein- cysteine methyltransferase; TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S- methyltransferase DNA binding.
       0.773
Tpau_3551
PFAM: 2OG-Fe(II) oxygenase; KEGG: jde:Jden_0402 2OG-Fe(II) oxygenase.
       0.773
Tpau_3547
Thiosulfate sulfurtransferase; PFAM: Rhodanese domain protein; KEGG: mav:MAV_0756 putative thiosulfate sulfurtransferase; SMART: Rhodanese domain protein.
       0.636
Tpau_3548
KEGG: rer:RER_48110 hypothetical protein.
       0.636
Tpau_3552
KEGG: rop:ROP_56890 hypothetical protein.
       0.497
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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