Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_3663PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: nfa:nfa30340 short chain dehydrogenase. (250 aa)    
Predicted Functional Partners:
Tpau_0389
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rop:ROP_38490 putative oxidoreductase.
  
     0.660
Tpau_0045
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mab:MAB_1526 short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
    0.636
Tpau_1315
PFAM: MaoC domain protein dehydratase; Beta- ketoacyl synthase; Acyl transferase; domain of unknown function DUF1729; KEGG: nfa:nfa12570 putative fatty acid synthase.
  
 0.632
Tpau_2701
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rme:Rmet_1333 acetoacetyl-CoA reductase.
  
     0.608
Tpau_3662
PFAM: low temperature requirement A; KEGG: rop:ROP_58670 hypothetical membrane protein.
       0.601
Tpau_3664
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate- binding; KEGG: mab:MAB_4658 LysR family transcriptional regulator.
 
     0.598
Tpau_2355
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bch:Bcen2424_6247 short chain dehydrogenase.
  
 
   0.588
Tpau_2974
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rop:ROP_57060 putative oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
   0.586
Tpau_3825
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rop:ROP_47510 putative oxidoreductase.
  
    0.558
Tpau_1373
Thioester reductase domain protein; KEGG: mab:MAB_2962 fatty-acid-CoA ligase FadD; TIGRFAM: thioester reductase domain protein; PFAM: Male sterility domain; AMP-dependent synthetase and ligase; phosphopantetheine-binding.
  
 
 0.502
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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