Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
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textmining
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_3688KEGG: cef:CE1565 putative ABC transporter permease protein; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase. (609 aa)    
Predicted Functional Partners:
Tpau_3689
PFAM: ABC transporter related; ABC transporter transmembrane region; KEGG: fal:FRAAL4165 putative ABC transporter transmembrane protein.
   
0.912
Tpau_3691
L-lysine 6-monooxygenase (NADPH); KEGG: rer:RER_09790 L-ornithine N5-oxygenase.
 
  
 0.894
Tpau_3685
PFAM: AMP-dependent synthetase and ligase; KEGG: rop:ROP_48840 2,3-dihydroxybenzoate-AMP ligase.
  
  
 0.881
Tpau_3687
PFAM: FAD-binding 9 siderophore-interacting domain protein; Siderophore-interacting protein; KEGG: ami:Amir_2724 siderophore-interacting protein.
 
 
 0.880
Tpau_3690
PFAM: formyl transferase domain protein; KEGG: rop:ROP_48100 putative formyltransferase.
 
   
 0.854
Tpau_3686
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rop:ROP_48850 2,3-dihydro-2,3- dihydroxybenzoate dehydrogenase.
 
 
  0.848
Tpau_3683
KEGG: rha:RHA1_ro04795 isochorismate synthase; TIGRFAM: isochorismate synthase; PFAM: Chorismate binding-like.
  
    0.810
Tpau_2051
KEGG: sgr:SGR_5757 putative ABC transporter ATP- binding protein; PFAM: ABC transporter related; SMART: AAA ATPase.
 
     
0.804
Tpau_3684
PFAM: isochorismatase hydrolase; KEGG: rer:RER_26990 isochorismatase.
  
    0.782
Tpau_3692
PFAM: phosphopantetheine-binding; KEGG: rer:RER_26960 hypothetical protein.
  
  
 0.693
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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