Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_3691L-lysine 6-monooxygenase (NADPH); KEGG: rer:RER_09790 L-ornithine N5-oxygenase. (432 aa)    
Predicted Functional Partners:
Tpau_3693
Amino acid adenylation domain protein; KEGG: rop:ROP_20370 non-ribosomal peptide synthetase; TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; Thioesterase; phosphopantetheine-binding; condensation domain protein.
 
 
 0.909
Tpau_3688
KEGG: cef:CE1565 putative ABC transporter permease protein; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase.
 
  
 0.894
Tpau_3985
PFAM: MbtH domain protein; KEGG: mjl:Mjls_3474 MbtH domain-containing protein.
 
  
 0.894
Tpau_3689
PFAM: ABC transporter related; ABC transporter transmembrane region; KEGG: fal:FRAAL4165 putative ABC transporter transmembrane protein.
 
  
 0.891
Tpau_3685
PFAM: AMP-dependent synthetase and ligase; KEGG: rop:ROP_48840 2,3-dihydroxybenzoate-AMP ligase.
  
 0.881
Tpau_3690
PFAM: formyl transferase domain protein; KEGG: rop:ROP_48100 putative formyltransferase.
 
   
 0.875
Tpau_3687
PFAM: FAD-binding 9 siderophore-interacting domain protein; Siderophore-interacting protein; KEGG: ami:Amir_2724 siderophore-interacting protein.
 
  
 0.834
Tpau_3684
PFAM: isochorismatase hydrolase; KEGG: rer:RER_26990 isochorismatase.
 
   
 0.822
Tpau_3987
TIGRFAM: amino acid adenylation domain protein; daunorubicin resistance ABC transporter ATPase subunit; PFAM: AMP-dependent synthetase and ligase; Thioesterase; ABC transporter related; phosphopantetheine- binding; condensation domain protein; KEGG: rer:RER_30610 non-ribosomal peptide synthetase; SMART: AAA ATPase.
 
 
 0.821
Tpau_3683
KEGG: rha:RHA1_ro04795 isochorismate synthase; TIGRFAM: isochorismate synthase; PFAM: Chorismate binding-like.
     
 0.803
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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