Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_3699PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: fre:Franean1_6415 short-chain dehydrogenase/reductase SDR. (246 aa)    
Predicted Functional Partners:
Tpau_2230
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; Male sterility domain; NAD-dependent epimerase/dehydratase; KEGG: bja:bll4020 short chain dehydrogenase.
 
    0.770
Tpau_2701
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rme:Rmet_1333 acetoacetyl-CoA reductase.
 
    0.764
Tpau_0389
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rop:ROP_38490 putative oxidoreductase.
 
    0.760
Tpau_3698
KEGG: mmi:MMAR_0763 hypothetical protein.
       0.727
Tpau_0387
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rop:ROP_38490 putative oxidoreductase.
 
    0.713
Tpau_1209
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rer:RER_41250 alcohol dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
   
 0.704
Tpau_3805
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rer:RER_09570 oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
    0.650
Tpau_3700
Transcriptional regulator, XRE family; KEGG: msm:MSMEG_0260 DNA-binding protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein.
       0.548
Tpau_0124
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: rha:RHA1_ro04000 short chain dehydrogenase.
 
    0.440
Tpau_3799
KEGG: rer:RER_07940 3Fe-4S ferredoxin.
  
  
 0.420
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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