Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_3726PFAM: transport system permease protein; KEGG: ami:Amir_4784 transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (352 aa)    
Predicted Functional Partners:
Tpau_3725
KEGG: ami:Amir_4783 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 
 0.972
Tpau_3724
PFAM: periplasmic binding protein; KEGG: ami:Amir_4782 periplasmic binding protein.
 
 
 0.930
Tpau_3775
KEGG: sco:SCO7217 iron ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 
 0.885
Tpau_2322
KEGG: mab:MAB_0548c putative iron compound ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 
 0.883
Tpau_1451
KEGG: cai:Caci_8853 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 
 0.864
Tpau_3756
KEGG: sco:SCO0495 iron-siderophore ABC-transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 
 0.863
Tpau_2323
PFAM: periplasmic binding protein; KEGG: mab:MAB_0547c putative iron compound ABC transporter, substrate-binding protein.
 
 
 0.780
Tpau_3721
PFAM: GHMP kinase; KEGG: ami:Amir_4780 GHMP kinase.
     
 0.763
Tpau_3723
PFAM: protein of unknown function DUF364; KEGG: ami:Amir_4779 hypothetical protein.
  
    0.763
Tpau_3722
PFAM: major facilitator superfamily MFS_1; KEGG: ami:Amir_3917 major facilitator superfamily MFS_1.
       0.757
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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