Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_3754Extracellular solute-binding protein family 3; KEGG: rop:ROP_19090 putative ABC transporter substrate-binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3. (326 aa)    
Predicted Functional Partners:
Tpau_3753
KEGG: rer:RER_14760 hypothetical protein.
 
  
 0.979
Tpau_3755
KEGG: mab:MAB_4224 serine/threonine-protein kinase; PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; Tetratricopeptide TPR_4; SMART: serine/threonine protein kinase; tyrosine protein kinase.
 
  
 0.978
Tpau_1788
KEGG: rop:ROP_67530 glutamate ABC transporter permease protein; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component.
 
 
 0.832
Tpau_1789
KEGG: mab:MAB_3052 putative glutamate ABC transporter, permease; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component.
 
 
 0.831
Tpau_1791
KEGG: mab:MAB_3050 putative glutamate ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 
 0.825
Tpau_2052
KEGG: kra:Krad_0928 polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component.
 
 
 0.793
Tpau_0790
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: extracellular solute-binding protein family 3; binding-protein-dependent transport systems inner membrane component; KEGG: mkm:Mkms_5030 polar amino acid ABC transporter, inner membrane subunit; SMART: extracellular solute-binding protein family 3.
 
 
 0.789
Tpau_0791
KEGG: rha:RHA1_ro01895 ABC amino acid transporter, ATP-binding component; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 
 0.789
Tpau_1987
KEGG: cai:Caci_3799 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 
 0.788
Tpau_2051
KEGG: sgr:SGR_5757 putative ABC transporter ATP- binding protein; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 
 0.759
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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