Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_3779PFAM: regulatory protein TetR; KEGG: mva:Mvan_4466 TetR family transcriptional regulator. (194 aa)    
Predicted Functional Partners:
Tpau_3778
PFAM: cytochrome P450; KEGG: mab:MAB_1406c cytochrome P450.
 
   
 0.810
Tpau_3780
PFAM: GCN5-related N-acetyltransferase; KEGG: rer:RER_05920 hypothetical protein.
       0.773
Tpau_3777
PFAM: Pyoverdine biosynthesis protein; KEGG: rsa:RSal33209_2067 pyoverdine biosynthesis protein.
       0.655
Tpau_3781
PFAM: Peptidase M1 membrane alanine aminopeptidase; KEGG: mab:MAB_0509c peptidase M1, membrane alanine aminopeptidase.
       0.476
Tpau_3776
PFAM: cytochrome P450; KEGG: rsa:RSal33209_2066 cytochrome P450 superfamily protein.
     
 0.473
Tpau_3782
PFAM: thioesterase superfamily protein; KEGG: nfa:nfa51370 hypothetical protein.
       0.411
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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