Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_3781PFAM: Peptidase M1 membrane alanine aminopeptidase; KEGG: mab:MAB_0509c peptidase M1, membrane alanine aminopeptidase. (458 aa)    
Predicted Functional Partners:
Tpau_3770
KEGG: rer:RER_05430 non-ribosomal peptide synthetase; TIGRFAM: non-ribosomal peptide synthetase; amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; transferase hexapeptide repeat containing protein; phosphopantetheine-binding.
 
 
 
 0.826
Tpau_3782
PFAM: thioesterase superfamily protein; KEGG: nfa:nfa51370 hypothetical protein.
       0.655
Tpau_3778
PFAM: cytochrome P450; KEGG: mab:MAB_1406c cytochrome P450.
   
 0.555
Tpau_2309
PFAM: protein of unknown function DUF1470; KEGG: art:Arth_4103 hypothetical protein.
  
     0.538
Tpau_3783
KEGG: mab:MAB_0923c hypothetical protein.
       0.538
Tpau_0917
PFAM: protein of unknown function DUF1470; KEGG: stp:Strop_4227 hypothetical protein.
  
     0.522
Tpau_3780
PFAM: GCN5-related N-acetyltransferase; KEGG: rer:RER_05920 hypothetical protein.
       0.484
Tpau_1211
2-oxoglutarate dehydrogenase, E1 subunit; KEGG: rha:RHA1_ro06012 alpha-ketoglutarate decarboxylase; TIGRFAM: 2-oxoglutarate dehydrogenase, E1 subunit; PFAM: Transketolase central region; dehydrogenase E1 component; catalytic domain of components of various dehydrogenase complexes.
   
   0.482
Tpau_3779
PFAM: regulatory protein TetR; KEGG: mva:Mvan_4466 TetR family transcriptional regulator.
       0.476
Tpau_3784
Putative transcriptional regulator, PaaX family; PFAM: PaaX domain protein domain; KEGG: mab:MAB_0920 putative repressor in the phenylacetic acid catabolism.
       0.474
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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