Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_3819KEGG: rer:RER_09310 hypothetical protein. (358 aa)    
Predicted Functional Partners:
Tpau_3818
PFAM: protein of unknown function DUF35; KEGG: rop:ROP_47840 hypothetical protein.
 
 
 0.990
Tpau_3820
KEGG: nfa:nfa5210 acetyl-CoA acetyltransferase.
 
  
 0.966
Tpau_0342
PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: mab:MAB_0851 fatty oxidation protein FadB.
  
 0.947
Tpau_4183
PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: mab:MAB_0851 fatty oxidation protein FadB.
  
 0.947
Tpau_3855
PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: nca:Noca_2790 acyl-CoA dehydrogenase domain- containing protein.
 
 0.932
Tpau_3856
PFAM: protein of unknown function DUF35; KEGG: rha:RHA1_ro04486 hypothetical protein.
 
 
 0.919
Tpau_3806
PFAM: acyl-CoA dehydrogenase domain protein; KEGG: rer:RER_09550 acyl-CoA dehydrogenase.
 
 0.870
Tpau_3797
PFAM: acyl-CoA dehydrogenase domain protein; KEGG: rer:RER_07070 hypothetical protein.
 
 0.867
Tpau_3826
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rha:RHA1_ro04652 enoyl-CoA hydratase.
 
 0.860
Tpau_3828
PFAM: coenzyme A transferase; KEGG: nca:Noca_2745 putative CoA transferase beta subunit.
 
 
 0.857
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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