Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_3825PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rop:ROP_47510 putative oxidoreductase. (261 aa)    
Predicted Functional Partners:
Tpau_3828
PFAM: coenzyme A transferase; KEGG: nca:Noca_2745 putative CoA transferase beta subunit.
 
 
 0.959
Tpau_3826
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rha:RHA1_ro04652 enoyl-CoA hydratase.
 
 0.956
Tpau_3827
PFAM: coenzyme A transferase; KEGG: stp:Strop_2605 coenzyme A transferase.
 
  
 0.954
Tpau_3824
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rop:ROP_47520 putative oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
   
0.805
Tpau_3829
PFAM: 2-nitropropane dioxygenase NPD; KEGG: rop:ROP_47470 putative oxidoreductase.
 
  
 0.803
Tpau_2701
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rme:Rmet_1333 acetoacetyl-CoA reductase.
  
    0.767
Tpau_3857
KEGG: nfa:nfa4520 hypothetical protein.
 
 0.734
Tpau_3838
PFAM: acyl-CoA dehydrogenase domain protein; KEGG: nfa:nfa4810 putative acyl-CoA dehydrogenase.
  
 0.708
Tpau_3818
PFAM: protein of unknown function DUF35; KEGG: rop:ROP_47840 hypothetical protein.
  
 
   0.689
Tpau_3856
PFAM: protein of unknown function DUF35; KEGG: rha:RHA1_ro04486 hypothetical protein.
  
 
   0.680
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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