Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_3859PFAM: thioesterase superfamily protein; KEGG: rer:RER_16990 hypothetical protein. (208 aa)    
Predicted Functional Partners:
Tpau_3857
KEGG: nfa:nfa4520 hypothetical protein.
 
  
 0.830
Tpau_3856
PFAM: protein of unknown function DUF35; KEGG: rha:RHA1_ro04486 hypothetical protein.
 
     0.819
Tpau_3855
PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: nca:Noca_2790 acyl-CoA dehydrogenase domain- containing protein.
 
    0.807
Tpau_3858
KEGG: rer:RER_07120 hypothetical protein.
     
 0.780
Tpau_0084
KEGG: msm:MSMEG_2697 hypothetical protein.
  
     0.694
Tpau_1315
PFAM: MaoC domain protein dehydratase; Beta- ketoacyl synthase; Acyl transferase; domain of unknown function DUF1729; KEGG: nfa:nfa12570 putative fatty acid synthase.
 
  
 0.682
Tpau_3853
KEGG: nfa:nfa5190 hypothetical protein.
 
     0.679
Tpau_3854
PFAM: Luciferase-like, subgroup; KEGG: nfa:nfa29530 hypothetical protein.
 
     0.601
Tpau_3599
KEGG: mab:MAB_4179c hypothetical protein.
  
     0.561
Tpau_2465
Transcriptional regulator, TetR family; PFAM: regulatory protein TetR; KEGG: rha:RHA1_ro00436 hypothetical protein.
  
     0.554
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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