Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
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textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_3935KEGG: rop:ROP_42280 hypothetical protein. (54 aa)    
Predicted Functional Partners:
Tpau_3934
PFAM: Endoribonuclease L-PSP; KEGG: ami:Amir_0241 endoribonuclease L-PSP.
  
    0.841
Tpau_3933
PFAM: beta-lactamase domain protein; KEGG: nfa:nfa3450 putative hydrolase.
       0.836
Tpau_1172
KEGG: rop:ROP_60320 hypothetical protein.
  
     0.771
Tpau_3936
PFAM: Anion-transporting ATPase; KEGG: rer:RER_04660 anion-transporting ATPase.
       0.676
Tpau_3937
PFAM: Anion-transporting ATPase; KEGG: mgi:Mflv_1367 anion-transporting ATPase.
       0.676
Tpau_3909
KEGG: msm:MSMEG_6171 hypothetical protein.
  
     0.562
Tpau_2386
KEGG: rer:RER_32690 hypothetical protein.
  
     0.493
lgt
Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.
  
     0.413
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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