Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_3936PFAM: Anion-transporting ATPase; KEGG: rer:RER_04660 anion-transporting ATPase. (357 aa)    
Predicted Functional Partners:
Tpau_3937
PFAM: Anion-transporting ATPase; KEGG: mgi:Mflv_1367 anion-transporting ATPase.
 
 
 
0.984
Tpau_0628
PFAM: Protein of unknown function DUF2596; KEGG: rha:RHA1_ro02072 hypothetical protein.
  
     0.747
Tpau_0663
PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; KEGG: mav:MAV_4649 NAD dependent epimerase/dehydratase family protein.
  
     0.721
Tpau_2678
PFAM: Polyketide cyclase/dehydrase; cyclase/dehydrase; KEGG: rop:ROP_08470 hypothetical protein.
 
    0.684
Tpau_3659
KEGG: rop:ROP_18240 putative Xre family DNA-binding protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein.
  
     0.682
Tpau_3933
PFAM: beta-lactamase domain protein; KEGG: nfa:nfa3450 putative hydrolase.
     
 0.677
Tpau_3934
PFAM: Endoribonuclease L-PSP; KEGG: ami:Amir_0241 endoribonuclease L-PSP.
       0.676
Tpau_3935
KEGG: rop:ROP_42280 hypothetical protein.
       0.676
Tpau_0664
KEGG: rer:RER_16370 hypothetical protein; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase.
  
     0.666
Tpau_0434
PFAM: acyl-CoA dehydrogenase domain protein; KEGG: nfa:nfa54510 putative acyl-CoA dehydrogenase.
  
     0.624
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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