Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_3941PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rop:ROP_41680 enoyl-CoA hydratase/isomerase family protein; Belongs to the enoyl-CoA hydratase/isomerase family. (255 aa)    
Predicted Functional Partners:
Tpau_3942
KEGG: rha:RHA1_ro02978 hypothetical protein.
  
 
 0.829
Tpau_1315
PFAM: MaoC domain protein dehydratase; Beta- ketoacyl synthase; Acyl transferase; domain of unknown function DUF1729; KEGG: nfa:nfa12570 putative fatty acid synthase.
  
 0.789
Tpau_3943
PFAM: regulatory protein TetR; KEGG: rop:ROP_27770 putative TetR family transcriptional regulator.
 
     0.775
Tpau_3667
KEGG: mab:MAB_4094c 3-hydroxybutyryl-CoA dehydrogenase; PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain protein.
 0.749
Tpau_1017
PFAM: acyl-CoA dehydrogenase domain protein; KEGG: rha:RHA1_ro04250 acyl-CoA dehydrogenase.
  
 0.617
Tpau_3944
PFAM: Carotenoid oxygenase; KEGG: msm:MSMEG_1564 lignostilbene-alpha,beta- dioxygenase.
 
   
 0.616
Tpau_3819
KEGG: rer:RER_09310 hypothetical protein.
  
 0.599
Tpau_3480
Mycocerosate synthase., 6-deoxyerythronolide-B synthase; KEGG: sen:SACE_4141 type I modular polyketide synthase; PFAM: short-chain dehydrogenase/reductase SDR; Beta- ketoacyl synthase; KR domain protein; Acyl transferase; NAD-dependent epimerase/dehydratase; phosphopantetheine- binding.
  
 0.596
Tpau_0428
TIGRFAM: acetyl-CoA acetyltransferase; KEGG: nfa:nfa54600 acetyl-CoA acetyltransferase; PFAM: Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.594
Tpau_3858
KEGG: rer:RER_07120 hypothetical protein.
  
 0.594
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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