Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_3951KEGG: aau:AAur_pTC10070 AsnC family transcriptional regulator; PFAM: Transcription regulator, AsnC-type-like; SMART: Transcription regulator, AsnC-type. (174 aa)    
Predicted Functional Partners:
Tpau_4074
Transcriptional regulator, AsnC family; KEGG: msm:MSMEG_4457 regulatory protein, AsnC/Lrp; PFAM: Transcription regulator, AsnC-type-like; SMART: Transcription regulator, AsnC-type.
  
     0.558
Tpau_3949
PFAM: Transketolase domain protein; Transketolase central region; KEGG: rha:RHA1_ro00814 transketolase, C-terminal subunit.
 
     0.498
Tpau_3952
PFAM: Aldehyde Dehydrogenase; KEGG: sus:Acid_2077 aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
    0.451
Tpau_3948
PFAM: aminotransferase class-III; KEGG: bmr:BMI_II1109 glutamate-1-semialdehyde 2,1- aminomutase, putative; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
     
 0.427
Tpau_3947
PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: rer:RER_26460 zinc-containing alcohol dehydrogenase.
       0.416
Tpau_3950
PFAM: Transketolase domain protein; KEGG: mno:Mnod_5660 transketolase domain protein.
       0.416
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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