Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
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[Homology]
Score
Tpau_3967Enoyl-CoA hydratase; KEGG: rha:RHA1_ro03777 nodulation protein; PFAM: MaoC domain protein dehydratase. (150 aa)    
Predicted Functional Partners:
Tpau_3966
KEGG: rha:RHA1_ro04489 PHA depolymerase; TIGRFAM: poly(3-hydroxyalkanoate) depolymerase; PFAM: alpha/beta hydrolase fold.
 
 
  0.834
Tpau_3968
PFAM: Poly-beta-hydroxybutyrate polymerase domain protein; alpha/beta hydrolase fold; KEGG: rha:RHA1_ro04491 poly(3-hydroxyalkanoic acid) synthase.
     
 0.702
Tpau_3969
PFAM: AMP-dependent synthetase and ligase; KEGG: rha:RHA1_ro04492 acyl-CoA synthetase.
     
 0.665
Tpau_1806
PFAM: acyl-CoA dehydrogenase domain protein; KEGG: mab:MAB_2495 acyl-CoA dehydrogenase.
 
 0.618
Tpau_3965
Ferric uptake regulator, Fur family; PFAM: ferric-uptake regulator; KEGG: nfa:nfa3250 putative ferric uptake regulator; Belongs to the Fur family.
       0.616
Tpau_2229
PFAM: aminoglycoside phosphotransferase; KEGG: rha:RHA1_ro10360 hypothetical protein.
 
 
 0.559
Tpau_1382
PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: svi:Svir_23320 Zn-dependent oxidoreductase, NADPH:quinone reductase.
 
 
 0.558
Tpau_0449
Catalase; KEGG: sgr:SGR_1958 putative catalase; PFAM: Catalase related subgroup; Catalase domain protein; Belongs to the catalase family.
   
 0.552
Tpau_1860
PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: nfa:nfa34080 putative acyl-CoA dehydrogenase.
 
 0.538
Tpau_3835
PFAM: acyl-CoA dehydrogenase domain protein; KEGG: nfa:nfa4840 putative acyl-CoA dehydrogenase.
 
 0.524
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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