Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Tpau_4019PFAM: protein of unknown function DUF1212; KEGG: msm:MSMEG_3837 hypothetical protein. (411 aa)    
Predicted Functional Partners:
Tpau_4020
PFAM: Protein of unknown function DUF2029; KEGG: rer:RER_03630 glycosyltransferase.
       0.773
Tpau_4021
Putative transcriptional regulator, GntR family; KEGG: rop:ROP_41200 aspartate aminotransferase AspT.
       0.697
Tpau_4018
PFAM: Alkaline phosphatase; KEGG: rer:RER_19780 alkaline phosphatase; SMART: Alkaline phosphatase; Belongs to the alkaline phosphatase family.
       0.580
Tpau_0707
KEGG: kra:Krad_0189 hypothetical protein.
  
     0.446
Tpau_1348
SMART: PA14 domain protein; KEGG: ote:Oter_0060 hypothetical protein.
  
     0.401
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.