Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
Tpau_4022PFAM: Activator of Hsp90 ATPase 1 family protein; Polyketide cyclase/dehydrase; KEGG: rop:ROP_42160 hypothetical protein. (149 aa)    
Predicted Functional Partners:
Tpau_3125
PFAM: Protein of unknown function DUF2266, transmembrane; KEGG: ret:RHE_CH00472 hypothetical protein.
  
     0.602
Tpau_4023
KEGG: fre:Franean1_1509 alpha/beta hydrolase fold.
       0.562
Tpau_3564
PFAM: protein of unknown function DUF899 thioredoxin family protein; KEGG: rop:ROP_70390 hypothetical protein.
 
     0.481
Tpau_4024
KEGG: rop:ROP_55300 hypothetical protein.
       0.480
Tpau_4025
KEGG: mab:MAB_1171c hypothetical protein.
       0.480
Tpau_3302
Transcriptional regulator, ArsR family; KEGG: sme:SMc02639 putative transcription regulator protein; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR.
 
  
 0.454
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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