node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Tpau_2173 | Tpau_3810 | Tpau_2173 | Tpau_3810 | KEGG: rop:ROP_05710 putative 5'-3' exonuclease; PFAM: 5'-3' exonuclease, N-terminal resolvase-like domain; 5'-3' exonuclease, SAM-fold domain; SMART: 5'-3' exonuclease; Helix-hairpin-helix domain protein class 2. | KEGG: rha:RHA1_ro01648 ATP-dependent DNA ligase; TIGRFAM: DNA ligase I, ATP-dependent Dnl1; PFAM: ATP dependent DNA ligase; DNA ligase domain protein; ATP dependent DNA ligase domain protein. | 0.653 |
Tpau_2173 | Tpau_4038 | Tpau_2173 | Tpau_4038 | KEGG: rop:ROP_05710 putative 5'-3' exonuclease; PFAM: 5'-3' exonuclease, N-terminal resolvase-like domain; 5'-3' exonuclease, SAM-fold domain; SMART: 5'-3' exonuclease; Helix-hairpin-helix domain protein class 2. | PFAM: DNA primase small subunit; KEGG: nca:Noca_3665 hypothetical protein. | 0.418 |
Tpau_2173 | Tpau_4039 | Tpau_2173 | Tpau_4039 | KEGG: rop:ROP_05710 putative 5'-3' exonuclease; PFAM: 5'-3' exonuclease, N-terminal resolvase-like domain; 5'-3' exonuclease, SAM-fold domain; SMART: 5'-3' exonuclease; Helix-hairpin-helix domain protein class 2. | PFAM: ATP dependent DNA ligase; KEGG: rop:ROP_51680 ATP-dependent DNA ligase LigC. | 0.759 |
Tpau_3810 | Tpau_2173 | Tpau_3810 | Tpau_2173 | KEGG: rha:RHA1_ro01648 ATP-dependent DNA ligase; TIGRFAM: DNA ligase I, ATP-dependent Dnl1; PFAM: ATP dependent DNA ligase; DNA ligase domain protein; ATP dependent DNA ligase domain protein. | KEGG: rop:ROP_05710 putative 5'-3' exonuclease; PFAM: 5'-3' exonuclease, N-terminal resolvase-like domain; 5'-3' exonuclease, SAM-fold domain; SMART: 5'-3' exonuclease; Helix-hairpin-helix domain protein class 2. | 0.653 |
Tpau_3810 | Tpau_4038 | Tpau_3810 | Tpau_4038 | KEGG: rha:RHA1_ro01648 ATP-dependent DNA ligase; TIGRFAM: DNA ligase I, ATP-dependent Dnl1; PFAM: ATP dependent DNA ligase; DNA ligase domain protein; ATP dependent DNA ligase domain protein. | PFAM: DNA primase small subunit; KEGG: nca:Noca_3665 hypothetical protein. | 0.766 |
Tpau_3810 | Tpau_4039 | Tpau_3810 | Tpau_4039 | KEGG: rha:RHA1_ro01648 ATP-dependent DNA ligase; TIGRFAM: DNA ligase I, ATP-dependent Dnl1; PFAM: ATP dependent DNA ligase; DNA ligase domain protein; ATP dependent DNA ligase domain protein. | PFAM: ATP dependent DNA ligase; KEGG: rop:ROP_51680 ATP-dependent DNA ligase LigC. | 0.591 |
Tpau_3810 | ku | Tpau_3810 | Tpau_0202 | KEGG: rha:RHA1_ro01648 ATP-dependent DNA ligase; TIGRFAM: DNA ligase I, ATP-dependent Dnl1; PFAM: ATP dependent DNA ligase; DNA ligase domain protein; ATP dependent DNA ligase domain protein. | Ku protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family. | 0.860 |
Tpau_4038 | Tpau_2173 | Tpau_4038 | Tpau_2173 | PFAM: DNA primase small subunit; KEGG: nca:Noca_3665 hypothetical protein. | KEGG: rop:ROP_05710 putative 5'-3' exonuclease; PFAM: 5'-3' exonuclease, N-terminal resolvase-like domain; 5'-3' exonuclease, SAM-fold domain; SMART: 5'-3' exonuclease; Helix-hairpin-helix domain protein class 2. | 0.418 |
Tpau_4038 | Tpau_3810 | Tpau_4038 | Tpau_3810 | PFAM: DNA primase small subunit; KEGG: nca:Noca_3665 hypothetical protein. | KEGG: rha:RHA1_ro01648 ATP-dependent DNA ligase; TIGRFAM: DNA ligase I, ATP-dependent Dnl1; PFAM: ATP dependent DNA ligase; DNA ligase domain protein; ATP dependent DNA ligase domain protein. | 0.766 |
Tpau_4038 | Tpau_4039 | Tpau_4038 | Tpau_4039 | PFAM: DNA primase small subunit; KEGG: nca:Noca_3665 hypothetical protein. | PFAM: ATP dependent DNA ligase; KEGG: rop:ROP_51680 ATP-dependent DNA ligase LigC. | 0.995 |
Tpau_4038 | Tpau_4040 | Tpau_4038 | Tpau_4040 | PFAM: DNA primase small subunit; KEGG: nca:Noca_3665 hypothetical protein. | PFAM: protein of unknown function DUF664; KEGG: nfa:nfa32260 hypothetical protein. | 0.585 |
Tpau_4038 | Tpau_4041 | Tpau_4038 | Tpau_4041 | PFAM: DNA primase small subunit; KEGG: nca:Noca_3665 hypothetical protein. | PFAM: Helix-turn-helix type 11 domain protein; regulatory protein DeoR; KEGG: nfa:nfa32250 putative transcriptional regulator. | 0.430 |
Tpau_4038 | gluQ | Tpau_4038 | Tpau_4042 | PFAM: DNA primase small subunit; KEGG: nca:Noca_3665 hypothetical protein. | Glutamate--tRNA ligase; Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5-dihydroxy-2- cyclopenten-1-yl) moiety of the queuosine in the wobble position of the QUC anticodon; Belongs to the class-I aminoacyl-tRNA synthetase family. GluQ subfamily. | 0.440 |
Tpau_4038 | ku | Tpau_4038 | Tpau_0202 | PFAM: DNA primase small subunit; KEGG: nca:Noca_3665 hypothetical protein. | Ku protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family. | 0.886 |
Tpau_4039 | Tpau_2173 | Tpau_4039 | Tpau_2173 | PFAM: ATP dependent DNA ligase; KEGG: rop:ROP_51680 ATP-dependent DNA ligase LigC. | KEGG: rop:ROP_05710 putative 5'-3' exonuclease; PFAM: 5'-3' exonuclease, N-terminal resolvase-like domain; 5'-3' exonuclease, SAM-fold domain; SMART: 5'-3' exonuclease; Helix-hairpin-helix domain protein class 2. | 0.759 |
Tpau_4039 | Tpau_3810 | Tpau_4039 | Tpau_3810 | PFAM: ATP dependent DNA ligase; KEGG: rop:ROP_51680 ATP-dependent DNA ligase LigC. | KEGG: rha:RHA1_ro01648 ATP-dependent DNA ligase; TIGRFAM: DNA ligase I, ATP-dependent Dnl1; PFAM: ATP dependent DNA ligase; DNA ligase domain protein; ATP dependent DNA ligase domain protein. | 0.591 |
Tpau_4039 | Tpau_4038 | Tpau_4039 | Tpau_4038 | PFAM: ATP dependent DNA ligase; KEGG: rop:ROP_51680 ATP-dependent DNA ligase LigC. | PFAM: DNA primase small subunit; KEGG: nca:Noca_3665 hypothetical protein. | 0.995 |
Tpau_4039 | Tpau_4040 | Tpau_4039 | Tpau_4040 | PFAM: ATP dependent DNA ligase; KEGG: rop:ROP_51680 ATP-dependent DNA ligase LigC. | PFAM: protein of unknown function DUF664; KEGG: nfa:nfa32260 hypothetical protein. | 0.585 |
Tpau_4039 | Tpau_4041 | Tpau_4039 | Tpau_4041 | PFAM: ATP dependent DNA ligase; KEGG: rop:ROP_51680 ATP-dependent DNA ligase LigC. | PFAM: Helix-turn-helix type 11 domain protein; regulatory protein DeoR; KEGG: nfa:nfa32250 putative transcriptional regulator. | 0.436 |
Tpau_4039 | gluQ | Tpau_4039 | Tpau_4042 | PFAM: ATP dependent DNA ligase; KEGG: rop:ROP_51680 ATP-dependent DNA ligase LigC. | Glutamate--tRNA ligase; Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5-dihydroxy-2- cyclopenten-1-yl) moiety of the queuosine in the wobble position of the QUC anticodon; Belongs to the class-I aminoacyl-tRNA synthetase family. GluQ subfamily. | 0.506 |