Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Tpau_4084KEGG: nfa:nfa51180 hypothetical protein. (185 aa)    
Predicted Functional Partners:
Tpau_0739
PFAM: MaoC domain protein dehydratase; KEGG: rop:ROP_16600 beta-hydroxyacyl-[acyl-carrier- protein] dehydratase subunit HadB.
 
 0.992
Tpau_1386
KEGG: rop:ROP_11060 hypothetical protein.
  
   
 0.600
Tpau_2723
Putative transcriptional regulator, PucR family; KEGG: rha:RHA1_ro01198 hypothetical protein.
  
     0.577
Tpau_4083
PFAM: protein of unknown function DUF1470; KEGG: rop:ROP_21400 hypothetical protein.
       0.566
Tpau_1774
PFAM: GCN5-related N-acetyltransferase; KEGG: rop:ROP_67390 putative acetyltransferase; Belongs to the acetyltransferase family.
  
     0.556
Tpau_0449
Catalase; KEGG: sgr:SGR_1958 putative catalase; PFAM: Catalase related subgroup; Catalase domain protein; Belongs to the catalase family.
   
 0.552
Tpau_2143
PFAM: protein of unknown function DUF75; KEGG: rha:RHA1_ro00860 hypothetical protein.
  
     0.533
Tpau_1511
PFAM: RDD domain containing protein; KEGG: rop:ROP_08830 hypothetical membrane protein.
  
    0.528
Tpau_2724
PFAM: Acyl transferase; KEGG: nfa:nfa16150 acyl-carrier-protein S- malonyltransferase.
  
   
 0.527
Tpau_0572
Lsr2 protein; KEGG: msm:MSMEG_6092 Lsr2 protein.
  
     0.491
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.