Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Tpau_4132Transcriptional regulator, TetR family; PFAM: regulatory protein TetR; Tetracyclin repressor domain protein; KEGG: nfa:nfa18310 putative transcriptional regulator. (192 aa)    
Predicted Functional Partners:
Tpau_4131
PFAM: BioY protein; KEGG: lxx:Lxx20880 biotin synthase.
 
   
 0.678
Tpau_4129
PFAM: cobalt transport protein; KEGG: sen:SACE_1190 cobalt transport system permease protein.
 
   
 0.656
Tpau_4130
ABC transporter related protein; KEGG: tfu:Tfu_2313 ABC-type cobalt transport system ATPase component; PFAM: ABC transporter related; SMART: AAA ATPase.
 
   
 0.656
Tpau_2572
Transcriptional regulator, TetR family; PFAM: regulatory protein TetR; Tetracyclin repressor domain protein; KEGG: ami:Amir_4056 transcriptional regulator, TetR family.
  
     0.646
Tpau_0632
PFAM: regulatory protein TetR; KEGG: rer:RER_55150 TetR family transcriptional regulator.
  
     0.565
Tpau_0040
PFAM: regulatory protein TetR; KEGG: sen:SACE_5722 TetR family transcriptional regulator.
  
     0.468
Tpau_2453
PFAM: regulatory protein TetR; KEGG: mab:MAB_2957c TetR family transcriptional regulator.
  
   
 0.427
Tpau_3462
PFAM: regulatory protein TetR; KEGG: ami:Amir_2879 regulatory protein TetR.
  
     0.419
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.