Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
Tpau_4190KEGG: rop:ROP_32270 hypothetical membrane protein. (481 aa)    
Predicted Functional Partners:
Tpau_0119
TIGRFAM: RecB family nuclease, putative; KEGG: nfa:nfa1140 hypothetical protein.
  
     0.738
Tpau_2691
KEGG: nfa:nfa17250 hypothetical protein.
  
     0.701
Tpau_1263
Myosin; KEGG: rha:RHA1_ro01457 myosin.
  
     0.668
Tpau_1679
KEGG: nfa:nfa41210 hypothetical protein.
  
     0.629
Tpau_2874
KEGG: rer:RER_23860 hypothetical protein.
  
     0.605
Tpau_0830
KEGG: nfa:nfa6440 hypothetical protein.
  
     0.576
Tpau_0913
Phage shock protein C, PspC; PFAM: PspC domain protein; KEGG: nfa:nfa9000 hypothetical protein.
  
     0.555
Tpau_1917
PFAM: Protein of unknown function, PGPGW, transmembrane; KEGG: rha:RHA1_ro06877 hypothetical protein.
  
     0.551
Tpau_1973
KEGG: rop:ROP_69140 hypothetical protein.
  
     0.551
Tpau_3648
PFAM: Protein of unknown function DUF2505; KEGG: nfa:nfa51990 hypothetical protein.
  
     0.550
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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