Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Tpau_4211ABC transporter related protein; KEGG: tfu:Tfu_1921 ABC-type sugar transport system ATPase component; PFAM: ABC transporter related; SMART: AAA ATPase. (276 aa)    
Predicted Functional Partners:
Tpau_4212
KEGG: tfu:Tfu_1922 solute-binding protein.
 
 
 0.995
Tpau_4210
PFAM: inner-membrane translocator; KEGG: rsh:Rsph17029_3438 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 0.993
Tpau_3557
PFAM: inner-membrane translocator; KEGG: msm:MSMEG_6803 ribose transport system permease protein RbsC.
 
 0.899
Tpau_1359
PFAM: inner-membrane translocator; KEGG: rop:ROP_10620 putative ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.842
Tpau_3558
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: msm:MSMEG_6804 sugar ABC transporter substrate-binding protein.
 
 
 0.829
Tpau_3102
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: pjd:Pjdr2_5327 periplasmic binding protein/LacI transcriptional regulator.
 
 
 0.770
Tpau_1358
KEGG: rop:ROP_05200 putative ABC transporter substrate-binding protein.
 
 
 0.683
Tpau_0186
KEGG: mkm:Mkms_0089 PTS system, fructose subfamily, IIC subunit; TIGRFAM: PTS system, fructose subfamily, IIC subunit; PTS system, fructose subfamily, IIA subunit; PTS system, fructose-specific, IIB subunnit; PFAM: phosphotransferase system PTS fructose- specific IIB subunit; phosphotransferase system EIIC; phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2.
     
 0.520
rbsK
PfkB domain protein; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
 
  
 0.468
Tpau_4213
KEGG: nca:Noca_3454 hypothetical protein.
       0.411
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
Server load: medium (46%) [HD]