Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
folEKEGG: fjo:Fjoh_2270 GTP cyclohydrolase I; TIGRFAM: GTP cyclohydrolase I; PFAM: GTP cyclohydrolase I. (223 aa)    
Predicted Functional Partners:
Coch_2108
KEGG: fps:FP1425 dihydropteroate synthase; TIGRFAM: dihydropteroate synthase; PFAM: dihydropteroate synthase DHPS.
 
  
 0.962
Coch_0617
PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; KEGG: fjo:Fjoh_0596 putative 6-pyruvoyl tetrahydropterin synthase.
  
 
 0.961
Coch_1530
TIGRFAM:2-amino-4-hydroxy-6- hydroxymethyldihydropter idinepyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin- pyrophosphokinase HPPK; deoxynucleoside kinase; KEGG: gfo:GFO_0246 protein containing HppK and dNK domain.
  
 0.952
ribB
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
  
 
 0.940
Coch_1032
Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.
 
  
 0.939
Coch_0399
PFAM: Alkaline phosphatase; SMART: Alkaline phosphatase; KEGG: fjo:Fjoh_3187 alkaline phosphatase; Belongs to the alkaline phosphatase family.
     
  0.900
Coch_0007
(p)ppGpp synthetase I, SpoT/RelA; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.
     
  0.800
Coch_0594
TIGRFAM: anaerobic ribonucleoside-triphosphate reductase; KEGG: bba:Bd2593 anaerobic ribonucleoside triphosphate reductase.
     
  0.800
Coch_1434
PFAM: adenylate cyclase; KEGG: swp:swp_0238 adenylate cyclase.
     
  0.800
Coch_1979
KEGG: fjo:Fjoh_0461 FolC bifunctional protein; TIGRFAM: FolC bifunctional protein; PFAM: Mur ligase middle domain protein.
 
  
 0.702
Your Current Organism:
Capnocytophaga ochracea
NCBI taxonomy Id: 521097
Other names: C. ochracea DSM 7271, Capnocytophaga ochracea ATCC 27872, Capnocytophaga ochracea DSM 7271, Capnocytophaga ochracea str. DSM 7271, Capnocytophaga ochracea strain DSM 7271
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