Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
aroQ3-dehydroquinate dehydratase, type II; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family. (139 aa)    
Predicted Functional Partners:
Coch_1585
3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ).
 
 0.983
Coch_0068
KEGG: gfo:GFO_1858 conserved hypothetical protein, secreted.
       0.773
Coch_0069
PFAM: glycosyl transferase family 9; KEGG: gfo:GFO_3278 RfaQ-like lipopolysaccharide core biosynthesis glycosyl transferase.
       0.773
Coch_0065
methylated-DNA/protein- cysteinemethyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated.
       0.701
Coch_0066
KEGG: fjo:Fjoh_1548 AsmA family protein.
       0.701
Coch_0064
PFAM: GSCFA domain protein; KEGG: fjo:Fjoh_1897 hypothetical protein.
       0.682
Coch_2008
TIGRFAM: trigger factor; PFAM: trigger factor domain; KEGG: gfo:GFO_0222 trigger factor.
  
  
 0.659
Coch_0228
PFAM: DAHP synthetase I/KDSA; Chorismate mutase; KEGG: gfo:GFO_0343 bifunctional AroA(G) protein.
 
   
 0.638
Coch_0315
Preprotein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.
  
    0.638
Coch_2085
PFAM: Shikimate dehydrogenase substrate binding domain protein; Shikimate/quinate 5-dehydrogenase; KEGG: gfo:GFO_0767 shikimate 5-dehydrogenase.
 
  
 0.613
Your Current Organism:
Capnocytophaga ochracea
NCBI taxonomy Id: 521097
Other names: C. ochracea DSM 7271, Capnocytophaga ochracea ATCC 27872, Capnocytophaga ochracea DSM 7271, Capnocytophaga ochracea str. DSM 7271, Capnocytophaga ochracea strain DSM 7271
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