Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Coch_0095PFAM: glycosyl transferase family 2; KEGG: gfo:GFO_3619 transmembrane family-2 glycosyl transferase-possibly involved in biofilm formation. (494 aa)    
Predicted Functional Partners:
Coch_1848
KEGG: gfo:GFO_2761 secreted protein.
  
     0.559
Coch_1919
PFAM: Tetratricopeptide TPR_2 repeat protein; TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; KEGG: fjo:Fjoh_2590 TPR repeat-containing protein.
  
 
 0.537
Coch_2029
SMART: Tetratricopeptide domain protein; KEGG: gfo:GFO_3274 hypothetical protein.
  
 
 0.537
Coch_0096
PFAM: protein of unknown function DUF419; KEGG: gfo:GFO_0065 protein containing DUF419.
       0.526
Coch_0097
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: lbf:LBF_3007 lactoylglutathione-like lyase.
     
 0.515
Coch_0098
PFAM: 2-nitropropane dioxygenase NPD; KEGG: gfo:GFO_2224 2-nitropropane dioxygenase family protein.
       0.509
Coch_0094
PFAM: NUDIX hydrolase; KEGG: ppr:PBPRA1244 hypothetical protein.
       0.491
Coch_1824
Hypothetical protein; KEGG: afw:Anae109_2404 acyltransferase family protein.
  
     0.488
Coch_0004
KEGG: mxa:MXAN_3576 hypothetical protein.
  
     0.473
Coch_1388
KEGG: bfr:BF3612 hypothetical protein.
  
 
 0.472
Your Current Organism:
Capnocytophaga ochracea
NCBI taxonomy Id: 521097
Other names: C. ochracea DSM 7271, Capnocytophaga ochracea ATCC 27872, Capnocytophaga ochracea DSM 7271, Capnocytophaga ochracea str. DSM 7271, Capnocytophaga ochracea strain DSM 7271
Server load: low (8%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.