Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Coch_0097PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: lbf:LBF_3007 lactoylglutathione-like lyase. (139 aa)    
Predicted Functional Partners:
Coch_0098
PFAM: 2-nitropropane dioxygenase NPD; KEGG: gfo:GFO_2224 2-nitropropane dioxygenase family protein.
  
  
 0.805
Coch_0096
PFAM: protein of unknown function DUF419; KEGG: gfo:GFO_0065 protein containing DUF419.
       0.758
Coch_0136
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: gfo:GFO_1472 ferredoxin-like protein.
  
  
 0.669
tadA
CMP/dCMP deaminase zinc-binding; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.
   
  
 0.636
Coch_0727
KEGG: pgn:PGN_1350 hypothetical protein.
 
  
 0.609
ychF
GTP-binding protein YchF; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.
  
    0.565
Coch_0456
PFAM: nitroreductase; KEGG: pmu:PM0161 hypothetical protein.
  
  
 0.558
Coch_0484
PFAM: nitroreductase; KEGG: fjo:Fjoh_0114 nitroreductase.
  
  
 0.558
Coch_0095
PFAM: glycosyl transferase family 2; KEGG: gfo:GFO_3619 transmembrane family-2 glycosyl transferase-possibly involved in biofilm formation.
     
 0.515
Coch_0240
KEGG: fjo:Fjoh_0675 succinate dehydrogenase/fumarate reductase iron-sulfur subunit.
   
  
 0.513
Your Current Organism:
Capnocytophaga ochracea
NCBI taxonomy Id: 521097
Other names: C. ochracea DSM 7271, Capnocytophaga ochracea ATCC 27872, Capnocytophaga ochracea DSM 7271, Capnocytophaga ochracea str. DSM 7271, Capnocytophaga ochracea strain DSM 7271
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