Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Coch_0098PFAM: 2-nitropropane dioxygenase NPD; KEGG: gfo:GFO_2224 2-nitropropane dioxygenase family protein. (313 aa)    
Predicted Functional Partners:
Coch_0739
PFAM: Beta-ketoacyl synthase; KEGG: fjo:Fjoh_1093 beta-ketoacyl synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
 
 0.943
Coch_0745
PFAM: Beta-ketoacyl synthase; KEGG: fjo:Fjoh_1088 beta-ketoacyl synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
 
 0.943
Coch_0847
PFAM: Beta-ketoacyl synthase; KEGG: fps:FP2284 3-oxoacyl-(acyl-carrier-protein) synthase I; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
 
 0.943
Coch_1320
3-oxoacyl-(acyl-carrier-protein) synthase 2; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
  
 
 0.943
Coch_1495
Enoyl-(acyl-carrier-protein) reductase (NADH); KEGG: gfo:GFO_0653 enoyl-[acyl-carrier-protein] reductase [NADH] 1.
  
 
 0.921
fabZ
Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the thioester dehydratase family. FabZ subfamily.
  
 
 0.920
Coch_1765
Dehydratase; KEGG: fps:FP2259 dehydratase.
  
 
 0.920
Coch_0545
PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; KEGG: fps:FP2277 flexirubin-type pigment biosynthesis acyl carrier protein DarC1.
     
  0.900
lipB
Lipoate-protein ligase B; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate.
    
  0.811
Coch_0097
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: lbf:LBF_3007 lactoylglutathione-like lyase.
  
  
 0.805
Your Current Organism:
Capnocytophaga ochracea
NCBI taxonomy Id: 521097
Other names: C. ochracea DSM 7271, Capnocytophaga ochracea ATCC 27872, Capnocytophaga ochracea DSM 7271, Capnocytophaga ochracea str. DSM 7271, Capnocytophaga ochracea strain DSM 7271
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