STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
tpiATriosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. (249 aa)    
Predicted Functional Partners:
pgk
PFAM: phosphoglycerate kinase; KEGG: fjo:Fjoh_0977 phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
 
 0.997
Coch_1625
KEGG: fjo:Fjoh_4590 glyceraldehyde-3-phosphate dehydrogenase, type I; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
 0.997
pgi
PFAM: phosphoglucose isomerase (PGI); KEGG: fjo:Fjoh_0735 glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 0.981
Coch_0110
Fructose-bisphosphate aldolase, class II; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family.
  
 0.975
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.
  
 0.959
fda
PFAM: fructose-bisphosphate aldolase class-I; KEGG: fnu:FN0322 fructose-1,6-bisphosphate aldolase.
  
 0.955
eno
Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.
  
 
 0.950
Coch_1385
PFAM: Aldehyde Dehydrogenase; KEGG: gfo:GFO_0735 NADP-dependent glyceraldehyde-3- phosphate dehydrogenase.
  
 0.927
Coch_1576
PFAM: Transketolase domain protein; KEGG: gfo:GFO_0703 transketolase N terminal section.
    
 0.908
Coch_2019
PFAM: Transketolase central region; Transketolase domain protein; KEGG: fjo:Fjoh_0049 transketolase, central region.
    
  0.903
Your Current Organism:
Capnocytophaga ochracea
NCBI taxonomy Id: 521097
Other names: C. ochracea DSM 7271, Capnocytophaga ochracea ATCC 27872, Capnocytophaga ochracea DSM 7271, Capnocytophaga ochracea str. DSM 7271, Capnocytophaga ochracea strain DSM 7271
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