Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Coch_0135PFAM: tryptophan halogenase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; monooxygenase FAD- binding; FAD dependent oxidoreductase; KEGG: fps:FP2288 putative dehydrogenase/oxidoreductase. (417 aa)    
Predicted Functional Partners:
Coch_0383
PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; KEGG: fjo:Fjoh_1078 phospholipid/glycerol acyltransferase.
 
   
 0.823
Coch_0549
PFAM: lipid A biosynthesis acyltransferase; KEGG: fjo:Fjoh_1104 lipid A biosynthesis acyltransferase.
 
   
 0.808
Coch_0744
KEGG: fjo:Fjoh_1089 hypothetical protein.
 
  
 0.793
Coch_1763
PFAM: outer membrane lipoprotein carrier protein LolA; KEGG: fjo:Fjoh_1085 outer membrane lipoprotein carrier protein LolA.
 
   
 0.783
Coch_1765
Dehydratase; KEGG: fps:FP2259 dehydratase.
 
   
 0.773
Coch_0742
KEGG: fjo:Fjoh_1090 hypothetical protein.
 
   
 0.772
Coch_1761
PFAM: Beta-ketoacyl synthase; KEGG: fjo:Fjoh_1087 3-oxoacyl-(acyl-carrier- protein) synthase-like protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
   
 0.761
Coch_0480
PFAM: glycosyl transferase family 2; KEGG: fps:FP2257 glycosyl transferase, group 2 family protein.
 
   
 0.758
Coch_2087
PFAM: Electron transfer flavoprotein alpha/beta- subunit; KEGG: fps:FP0336 electron transfer flavoprotein subunit beta.
  
 
 0.750
Coch_0545
PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; KEGG: fps:FP2277 flexirubin-type pigment biosynthesis acyl carrier protein DarC1.
 
   
 0.746
Your Current Organism:
Capnocytophaga ochracea
NCBI taxonomy Id: 521097
Other names: C. ochracea DSM 7271, Capnocytophaga ochracea ATCC 27872, Capnocytophaga ochracea DSM 7271, Capnocytophaga ochracea str. DSM 7271, Capnocytophaga ochracea strain DSM 7271
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