Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Coch_0138PFAM: Inner membrane CreD family protein; KEGG: gfo:GFO_2560 hypothetical protein. (449 aa)    
Predicted Functional Partners:
Coch_0140
KEGG: gfo:GFO_2556 conserved hypothetical protein, membrane.
 
     0.773
Coch_0139
Transcriptional regulator; KEGG: gfo:GFO_2557 hypothetical protein.
 
     0.614
Coch_1028
PFAM: alpha-2-macroglobulin domain protein; alpha-2- macroglobulin domain protein 2; KEGG: fjo:Fjoh_1529 alpha-2-macroglobulin domain- containing protein.
  
     0.517
Coch_1430
KEGG: gfo:GFO_2924 hypothetical protein.
  
     0.477
Coch_0309
TIGRFAM: penicillin-binding protein 1C; PFAM: glycosyl transferase family 51; Penicillin- binding domain protein; penicillin-binding protein transpeptidase; KEGG: fps:FP2234 membrane carboxypeptidase/penicillin-binding protein PbpC.
  
     0.440
Your Current Organism:
Capnocytophaga ochracea
NCBI taxonomy Id: 521097
Other names: C. ochracea DSM 7271, Capnocytophaga ochracea ATCC 27872, Capnocytophaga ochracea DSM 7271, Capnocytophaga ochracea str. DSM 7271, Capnocytophaga ochracea strain DSM 7271
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.