Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Coch_0144PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; HI0933 family protein; KEGG: fjo:Fjoh_1507 FAD-dependent pyridine nucleotide-disulphide oxidoreductase. (352 aa)    
Predicted Functional Partners:
Coch_0142
PFAM: ferredoxin; KEGG: fps:FP2399 ferredoxin.
 
 
 
 0.951
Coch_1838
Cysteine desulfurase, SufS subfamily; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
  
 
  0.906
Coch_1354
TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: fjo:Fjoh_0199 thioredoxin reductase.
  
  
 
0.905
Coch_0771
PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: fjo:Fjoh_2117 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen.
  
 
 0.686
Coch_0143
Hypothetical protein; KEGG: csc:Csac_1174 YD repeat-containing protein.
       0.642
Coch_2011
KEGG: gfo:GFO_1404 thioredoxin-like protein.
 
 
 0.584
Coch_2143
PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: fjo:Fjoh_1048 ferredoxin.
   
 
 0.548
msrB
methionine-R-sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
  
  
 0.495
Coch_0711
PFAM: Oxidoreductase FAD-binding domain protein; oxidoreductase FAD/NAD(P)-binding domain protein; ferredoxin; KEGG: pfl:PFL_5093 CDP-6-deoxy-L-threo-D-glycero-4- hexulose-3-dehydrase reductase.
   
 
 0.480
Coch_0107
PFAM: Redoxin domain protein; alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: bvu:BVU_1977 putative thiol-disulfide oxidoreductase.
  
 
 0.471
Your Current Organism:
Capnocytophaga ochracea
NCBI taxonomy Id: 521097
Other names: C. ochracea DSM 7271, Capnocytophaga ochracea ATCC 27872, Capnocytophaga ochracea DSM 7271, Capnocytophaga ochracea str. DSM 7271, Capnocytophaga ochracea strain DSM 7271
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