Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Coch_0264KEGG: fjo:Fjoh_1279 phospholipid/glycerol acyltransferase. (377 aa)    
Predicted Functional Partners:
Coch_0263
KEGG: fjo:Fjoh_1280 L-asparaginase, type I; TIGRFAM: L-asparaginase, type I; PFAM: Asparaginase/glutaminase.
       0.786
Coch_0265
TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; KEGG: fjo:Fjoh_1278 TatD family hydrolase.
  
    0.644
Coch_0936
KEGG: gfo:GFO_3124 conserved hypothetical protein, secreted.
  
     0.578
Coch_1558
PFAM: OmpA/MotB domain protein; KEGG: fjo:Fjoh_3415 OmpA/MotB domain-containing protein.
  
     0.453
Coch_0262
PFAM: MotA/TolQ/ExbB proton channel; KEGG: gfo:GFO_0088 ExbB-like MotA/TolQ/ExbB family biopolymer transport protein.
       0.431
Coch_0631
PFAM: alpha amylase catalytic region; Domain of unknown function DUF1939; SMART: alpha amylase catalytic sub domain; KEGG: gfo:GFO_2141 cytoplasmic alpha-amylase.
  
    0.430
Coch_1811
TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3; Haloacid dehalogenase domain protein hydrolase; KEGG: gfo:GFO_2353 haloacid dehalogenase-like hydrolase.
 
    0.425
pyrD
Dihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.
   
  
 0.425
Coch_0260
PFAM: Biopolymer transport protein ExbD/TolR; KEGG: gfo:GFO_0090 hypothetical protein.
  
    0.402
Your Current Organism:
Capnocytophaga ochracea
NCBI taxonomy Id: 521097
Other names: C. ochracea DSM 7271, Capnocytophaga ochracea ATCC 27872, Capnocytophaga ochracea DSM 7271, Capnocytophaga ochracea str. DSM 7271, Capnocytophaga ochracea strain DSM 7271
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