Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Coch_0294Hypothetical protein; KEGG: fjo:Fjoh_2321 OmpA/MotB domain-containing protein. (464 aa)    
Predicted Functional Partners:
Coch_1284
PFAM: OmpA/MotB domain protein; Thrombospondin type 3 repeat; KEGG: gfo:GFO_3374 OmpA/MotB family outer membrane protein containing thrombospondin 3 repeats.
 
      0.831
Coch_0033
PFAM: Hyalin; KEGG: fjo:Fjoh_0979 hypothetical protein.
  
 
   0.709
Coch_1336
PFAM: Hyalin; KEGG: fjo:Fjoh_0979 hypothetical protein.
  
 
   0.703
Coch_0658
KEGG: fps:FP0016 putative adhesin precursor SprB.
  
 
   0.577
Coch_1097
KEGG: bth:BT_3046 hypothetical protein.
  
    0.537
Coch_1186
SMART: Tetratricopeptide domain protein; KEGG: fjo:Fjoh_2813 O-antigen polymerase.
 
  
 0.515
Coch_1791
KEGG: fjo:Fjoh_3471 hypothetical protein.
  
     0.505
Coch_1987
KEGG: fjo:Fjoh_4068 hypothetical protein.
  
     0.465
Coch_0272
KEGG: chu:CHU_2729 hypothetical protein.
  
     0.435
Coch_1447
PFAM: Sporulation domain protein; KEGG: fps:FP0015 putative cell surface protein precursor SprD.
  
    0.431
Your Current Organism:
Capnocytophaga ochracea
NCBI taxonomy Id: 521097
Other names: C. ochracea DSM 7271, Capnocytophaga ochracea ATCC 27872, Capnocytophaga ochracea DSM 7271, Capnocytophaga ochracea str. DSM 7271, Capnocytophaga ochracea strain DSM 7271
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