Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Coch_0318PFAM: OmpA/MotB domain protein; KEGG: bth:BT_1391 hypothetical protein. (387 aa)    
Predicted Functional Partners:
Coch_1292
PFAM: Bile acid:sodium symporter; KEGG: pdi:BDI_0245 putative sodium-dependent transporter.
  
     0.753
Coch_0245
KEGG: bvu:BVU_0248 hypothetical protein.
  
     0.689
Coch_0246
KEGG: bfs:BF3562 hypothetical protein.
  
    0.684
Coch_0690
KEGG: bvu:BVU_0533 acid phosphatase; PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related.
  
     0.457
Coch_1294
Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: fjo:Fjoh_3096 helix-turn-helix domain- containing protein.
  
     0.439
groL
Chaperonin GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.
  
  
 0.430
Coch_0691
PFAM: phosphate-selective porin O and P; KEGG: bvu:BVU_0532 putative polyphosphate-selective porin O.
  
     0.418
groS
Chaperonin Cpn10; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.
  
  
 0.401
Your Current Organism:
Capnocytophaga ochracea
NCBI taxonomy Id: 521097
Other names: C. ochracea DSM 7271, Capnocytophaga ochracea ATCC 27872, Capnocytophaga ochracea DSM 7271, Capnocytophaga ochracea str. DSM 7271, Capnocytophaga ochracea strain DSM 7271
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