Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
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textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
lolDABC transporter related; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner. (226 aa)    
Predicted Functional Partners:
Coch_0390
PFAM: protein of unknown function DUF214; KEGG: bfs:BF1933 putative permease component of ABC transporter.
 
 0.957
Coch_0778
PFAM: protein of unknown function DUF214; KEGG: fps:FP0239 ABC transporter permease.
 
 0.949
Coch_2125
PFAM: protein of unknown function DUF214; KEGG: gfo:GFO_2398 lipoprotein releasing system transmembrane protein.
  
 0.941
Coch_1780
PFAM: protein of unknown function DUF214; KEGG: fps:FP2022 ABC transporter permease.
 
 0.901
Coch_1555
PFAM: protein of unknown function DUF214; KEGG: fjo:Fjoh_1460 hypothetical protein.
 
 0.844
Coch_0340
PFAM: Smr protein/MutS2; KEGG: gfo:GFO_1881 Smr domain protein-possibly involved in DNA repair.
       0.773
Coch_1095
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: fps:FP2090 ABC transporter ATPase.
  
  
 0.755
Coch_0342
KEGG: bfs:BF2755 hypothetical protein.
   
   0.650
pheS
TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit; PFAM: phenylalanyl-tRNA synthetase class IIc; aminoacyl tRNA synthetase class II domain protein; KEGG: gfo:GFO_3424 phenylalanyl-tRNA synthetase subunit alpha; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.
 
 
   0.626
Coch_0339
Hypothetical protein.
       0.623
Your Current Organism:
Capnocytophaga ochracea
NCBI taxonomy Id: 521097
Other names: C. ochracea DSM 7271, Capnocytophaga ochracea ATCC 27872, Capnocytophaga ochracea DSM 7271, Capnocytophaga ochracea str. DSM 7271, Capnocytophaga ochracea strain DSM 7271
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