Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
lntApolipoprotein N-acyltransferase; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation; Belongs to the CN hydrolase family. Apolipoprotein N- acyltransferase subfamily. (532 aa)    
Predicted Functional Partners:
Coch_0449
PFAM: phenylalanine/histidine ammonia-lyase; KEGG: fjo:Fjoh_2576 histidine ammonia-lyase.
       0.541
secD
Protein-export membrane protein SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily.
     
 0.522
fabZ
Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the thioester dehydratase family. FabZ subfamily.
     
 0.509
Coch_1656
KEGG: fjo:Fjoh_2958 hypothetical protein.
  
     0.472
Coch_0362
PFAM: alpha amylase catalytic region; Cyclomaltodextrinase; SMART: alpha amylase catalytic sub domain; KEGG: fjo:Fjoh_1399 alpha amylase, catalytic region; Belongs to the glycosyl hydrolase 13 family.
  
   
 0.466
Coch_0447
PFAM: glycoside hydrolase family 3 domain protein; KEGG: fjo:Fjoh_3389 glycoside hydrolase family 3 protein.
       0.457
Coch_1810
TIGRFAM: signal peptidase I; PFAM: peptidase S24 and S26 domain protein; KEGG: gfo:GFO_0802 signal peptidase I; Belongs to the peptidase S26 family.
  
   
 0.456
Coch_0463
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: fjo:Fjoh_1672 RND family efflux transporter MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
     0.442
Coch_0450
6-phosphogluconolactonase; KEGG: bth:BT_4399 hypothetical protein.
       0.427
Your Current Organism:
Capnocytophaga ochracea
NCBI taxonomy Id: 521097
Other names: C. ochracea DSM 7271, Capnocytophaga ochracea ATCC 27872, Capnocytophaga ochracea DSM 7271, Capnocytophaga ochracea str. DSM 7271, Capnocytophaga ochracea strain DSM 7271
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