Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Coch_0469KEGG: fjo:Fjoh_1928 hypothetical protein. (422 aa)    
Predicted Functional Partners:
Coch_0468
PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; KEGG: gfo:GFO_0516 PAP2 superfamily membrane protein.
 
     0.615
Coch_0729
KEGG: fps:FP1192 hypothetical protein.
 
     0.588
Coch_0467
PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicases; helicase domain protein; KEGG: gfo:GFO_1099 DeaD-like DEAD box family ATP- dependent RNA helicase; Belongs to the DEAD box helicase family.
       0.563
Coch_0257
SMART: AAA ATPase; KEGG: fjo:Fjoh_0999 AAA ATPase.
 
     0.428
Coch_0663
TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; KEGG: fjo:Fjoh_0995 DNA protecting protein DprA.
 
     0.422
Coch_1083
KEGG: gfo:GFO_3236 hypothetical protein.
  
     0.418
Coch_1501
KEGG: gfo:GFO_0649 hypothetical protein.
  
     0.405
Your Current Organism:
Capnocytophaga ochracea
NCBI taxonomy Id: 521097
Other names: C. ochracea DSM 7271, Capnocytophaga ochracea ATCC 27872, Capnocytophaga ochracea DSM 7271, Capnocytophaga ochracea str. DSM 7271, Capnocytophaga ochracea strain DSM 7271
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