Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Coch_0507PFAM: protein of unknown function DUF224 cysteine- rich region domain protein; KEGG: fjo:Fjoh_4582 hypothetical protein. (257 aa)    
Predicted Functional Partners:
Coch_2114
KEGG: fps:FP0754 Fe-S oxidoreductase N-terminal region.
     0.980
Coch_0508
Phospholipase D/Transphosphatidylase; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol.
       0.773
Coch_1612
KEGG: gfo:GFO_2695 hypothetical protein.
  
 
 0.688
Coch_2088
PFAM: Electron transfer flavoprotein alpha subunit; Electron transfer flavoprotein alpha/beta-subunit; KEGG: gfo:GFO_0292 electron transfer flavoprotein subunit alpha.
 
  
 0.579
Coch_0506
KEGG: hypothetical protein.
       0.566
Coch_2087
PFAM: Electron transfer flavoprotein alpha/beta- subunit; KEGG: fps:FP0336 electron transfer flavoprotein subunit beta.
 
  
 0.564
Coch_1425
KEGG: gfo:GFO_0161 iron-sulfur binding oxidoreductase.
 
  
 0.512
menB
Naphthoate synthase; Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4-dihydroxy-2- naphthoyl-CoA (DHNA-CoA); Belongs to the enoyl-CoA hydratase/isomerase family. MenB subfamily.
     
 0.487
Coch_1625
KEGG: fjo:Fjoh_4590 glyceraldehyde-3-phosphate dehydrogenase, type I; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
   
  
 0.471
Coch_0711
PFAM: Oxidoreductase FAD-binding domain protein; oxidoreductase FAD/NAD(P)-binding domain protein; ferredoxin; KEGG: pfl:PFL_5093 CDP-6-deoxy-L-threo-D-glycero-4- hexulose-3-dehydrase reductase.
  
  
 0.421
Your Current Organism:
Capnocytophaga ochracea
NCBI taxonomy Id: 521097
Other names: C. ochracea DSM 7271, Capnocytophaga ochracea ATCC 27872, Capnocytophaga ochracea DSM 7271, Capnocytophaga ochracea str. DSM 7271, Capnocytophaga ochracea strain DSM 7271
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