Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Coch_0544KEGG: fps:FP2276 hypothetical protein. (131 aa)    
Predicted Functional Partners:
Coch_0545
PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; KEGG: fps:FP2277 flexirubin-type pigment biosynthesis acyl carrier protein DarC1.
 
     0.948
Coch_0547
PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; KEGG: fps:FP2279 3-oxoacyl-(acyl carrier protein) synthase III.
 
     0.947
Coch_0546
KEGG: fjo:Fjoh_1101 hypothetical protein.
 
     0.924
Coch_0548
KEGG: fps:FP2280 dialkylrecorsinol condensing enzyme DarA.
 
     0.890
Coch_0586
KEGG: fps:FP2275 hypothetical protein.
 
     0.811
Coch_0549
PFAM: lipid A biosynthesis acyltransferase; KEGG: fjo:Fjoh_1104 lipid A biosynthesis acyltransferase.
 
     0.796
Coch_0131
PFAM: ABC-2 type transporter; KEGG: fjo:Fjoh_1095 ABC-2 type transporter.
 
     0.787
Coch_1764
KEGG: fps:FP2261 hypothetical protein.
 
     0.784
Coch_1763
PFAM: outer membrane lipoprotein carrier protein LolA; KEGG: fjo:Fjoh_1085 outer membrane lipoprotein carrier protein LolA.
 
     0.780
Coch_0383
PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; KEGG: fjo:Fjoh_1078 phospholipid/glycerol acyltransferase.
 
     0.773
Your Current Organism:
Capnocytophaga ochracea
NCBI taxonomy Id: 521097
Other names: C. ochracea DSM 7271, Capnocytophaga ochracea ATCC 27872, Capnocytophaga ochracea DSM 7271, Capnocytophaga ochracea str. DSM 7271, Capnocytophaga ochracea strain DSM 7271
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