Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Coch_0552KEGG: fjo:Fjoh_2248 TonB-dependent receptor. (584 aa)    
Predicted Functional Partners:
Coch_0551
PFAM: Tetratricopeptide TPR_2 repeat protein; Tetratricopeptide TPR_4; TPR repeat-containing protein; Sel1 domain protein repeat-containing protein; SMART: Sel1 domain protein repeat-containing protein; Tetratricopeptide domain protein; KEGG: gfo:GFO_2543 conserved hypothetical protein, secreted.
 
   
 0.916
Coch_1978
Outer membrane transport energization protein TonB; KEGG: gfo:GFO_2900 hypothetical protein; TC 2.C.1.1.1.
 
 
 0.842
Coch_0278
KEGG: gfo:GFO_1098 secreted protein.
  
  
 0.770
Coch_1201
KEGG: gfo:GFO_1792 hypothetical protein.
  
     0.759
Coch_2120
KEGG: fps:FP2472 hypothetical protein.
  
     0.756
Coch_1460
KEGG: fps:FP1615 hypothetical protein.
  
     0.755
Coch_0608
KEGG: fps:FP0181 hypothetical protein.
  
     0.754
Coch_1505
KEGG: gfo:GFO_3546 hypothetical protein.
  
     0.748
Coch_2029
SMART: Tetratricopeptide domain protein; KEGG: gfo:GFO_3274 hypothetical protein.
  
     0.744
Coch_1728
KEGG: gfo:GFO_1569 secreted protein.
  
     0.741
Your Current Organism:
Capnocytophaga ochracea
NCBI taxonomy Id: 521097
Other names: C. ochracea DSM 7271, Capnocytophaga ochracea ATCC 27872, Capnocytophaga ochracea DSM 7271, Capnocytophaga ochracea str. DSM 7271, Capnocytophaga ochracea strain DSM 7271
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.