Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Coch_0595TIGRFAM: anaerobic ribonucleoside-triphosphate reductase activating protein; KEGG: hdu:HD0394 hypothetical protein. (161 aa)    
Predicted Functional Partners:
Coch_0594
TIGRFAM: anaerobic ribonucleoside-triphosphate reductase; KEGG: bba:Bd2593 anaerobic ribonucleoside triphosphate reductase.
 
  
 0.962
Coch_2105
PFAM: Transketolase domain protein; dehydrogenase E1 component; Transketolase central region; KEGG: fps:FP0719 putative pyruvate/branched-chain alpha-keto acid dehydrogenase (E1) component, alpha and beta subunits.
   
  
 0.678
Coch_1308
PFAM: Abortive infection protein; KEGG: mmp:MMP0485 hypothetical protein.
  
     0.562
Coch_2119
KEGG: fjo:Fjoh_1589 hypothetical protein.
   
  
 0.512
Coch_1871
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
     
 0.408
Your Current Organism:
Capnocytophaga ochracea
NCBI taxonomy Id: 521097
Other names: C. ochracea DSM 7271, Capnocytophaga ochracea ATCC 27872, Capnocytophaga ochracea DSM 7271, Capnocytophaga ochracea str. DSM 7271, Capnocytophaga ochracea strain DSM 7271
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