Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Coch_0690KEGG: bvu:BVU_0533 acid phosphatase; PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related. (258 aa)    
Predicted Functional Partners:
Coch_0394
TIGRFAM: riboflavin synthase, alpha subunit; PFAM: Lumazine-binding protein; KEGG: gfo:GFO_3338 riboflavin synthase subunit alpha.
     
  0.900
Coch_1375
TIGRFAM: riboflavin biosynthesis protein RibF; cytidyltransferase-related domain protein; PFAM: Riboflavin kinase; FAD synthetase; cytidylyltransferase; KEGG: fjo:Fjoh_0799 riboflavin biosynthesis protein RibF; Belongs to the ribF family.
     
  0.900
Coch_0691
PFAM: phosphate-selective porin O and P; KEGG: bvu:BVU_0532 putative polyphosphate-selective porin O.
 
     0.863
Coch_0692
Glucose-1-phosphatase; PFAM: histidine acid phosphatase; KEGG: ecf:ECH74115_1240 glucose-1-phosphatase.
 
     0.609
Coch_1292
PFAM: Bile acid:sodium symporter; KEGG: pdi:BDI_0245 putative sodium-dependent transporter.
 
     0.488
Coch_0219
KEGG: pgi:PG1685 hypothetical protein.
  
     0.470
Coch_0318
PFAM: OmpA/MotB domain protein; KEGG: bth:BT_1391 hypothetical protein.
  
     0.457
Your Current Organism:
Capnocytophaga ochracea
NCBI taxonomy Id: 521097
Other names: C. ochracea DSM 7271, Capnocytophaga ochracea ATCC 27872, Capnocytophaga ochracea DSM 7271, Capnocytophaga ochracea str. DSM 7271, Capnocytophaga ochracea strain DSM 7271
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