Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Coch_0716PFAM: sugar transferase; KEGG: fps:FP1283 putative undecaprenyl-phosphate glycosyl-1-phosphate transferase. (207 aa)    
Predicted Functional Partners:
Coch_0714
PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: fps:FP1278 aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
  
 0.945
Coch_0713
PFAM: polysaccharide biosynthesis protein CapD; 3- beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; short-chain dehydrogenase/reductase SDR; dTDP-4-dehydrorhamnose reductase; NAD-dependent epimerase/dehydratase; KEGG: gfo:GFO_1985 capsular polysaccharide biosynthesis protein.
 
  
 0.821
Coch_0715
PFAM: transferase hexapeptide repeat containing protein; KEGG: cco:CCC13826_2304 hypothetical protein.
 
     0.783
Coch_1106
KEGG: gme:Gmet_1330 hypothetical protein.
  
  
 0.694
Coch_0473
PFAM: polysaccharide export protein; protein of unknown function DUF1017; KEGG: bfs:BF1707 putative capsule polysaccharide export protein.
  
  
 0.680
Coch_0693
PFAM: glycosyl transferase family 2; KEGG: cts:Ctha_2072 glycosyl transferase family 2.
 
  
 0.656
Coch_0712
KEGG: hya:HY04AAS1_0500 nucleotide sugar dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP- glucose/GDP-mannose dehydrogenase dimerisation; UDP- glucose/GDP-mannose dehydrogenase; NAD-dependent glycerol- 3-phosphate dehydrogenase domain protein.
     
 0.615
Coch_1876
PFAM: Nucleotidyl transferase; KEGG: fps:FP1381 mannose-1-phosphate guanylyltransferase (GDP).
  
  
 0.584
Coch_1104
PFAM: polysaccharide biosynthesis protein; KEGG: apa:APP7_1475 putative O-antigen transporter.
 
  
 0.576
Coch_0708
PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: pfl:PFL_5096 lipopolysaccharide biosynthesis protein RfbH; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.565
Your Current Organism:
Capnocytophaga ochracea
NCBI taxonomy Id: 521097
Other names: C. ochracea DSM 7271, Capnocytophaga ochracea ATCC 27872, Capnocytophaga ochracea DSM 7271, Capnocytophaga ochracea str. DSM 7271, Capnocytophaga ochracea strain DSM 7271
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