Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Coch_0717PFAM: O-methyltransferase family 2; KEGG: bvu:BVU_1015 SAM-dependent methyltransferase. (365 aa)    
Predicted Functional Partners:
Coch_1763
PFAM: outer membrane lipoprotein carrier protein LolA; KEGG: fjo:Fjoh_1085 outer membrane lipoprotein carrier protein LolA.
 
     0.614
Coch_1418
PFAM: peptidase C45 acyl-coenzyme A:6- aminopenicillanic acid acyl-transferase; Tetratricopeptide TPR_2 repeat protein; KEGG: fjo:Fjoh_1076 peptidase C45, acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase.
 
     0.613
Coch_0742
KEGG: fjo:Fjoh_1090 hypothetical protein.
 
     0.568
Coch_0716
PFAM: sugar transferase; KEGG: fps:FP1283 putative undecaprenyl-phosphate glycosyl-1-phosphate transferase.
       0.559
Coch_0549
PFAM: lipid A biosynthesis acyltransferase; KEGG: fjo:Fjoh_1104 lipid A biosynthesis acyltransferase.
 
     0.555
Coch_0383
PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; KEGG: fjo:Fjoh_1078 phospholipid/glycerol acyltransferase.
 
     0.548
Coch_0480
PFAM: glycosyl transferase family 2; KEGG: fps:FP2257 glycosyl transferase, group 2 family protein.
 
     0.535
Coch_0714
PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: fps:FP1278 aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
  
    0.532
Coch_0715
PFAM: transferase hexapeptide repeat containing protein; KEGG: cco:CCC13826_2304 hypothetical protein.
       0.520
Coch_0744
KEGG: fjo:Fjoh_1089 hypothetical protein.
 
     0.520
Your Current Organism:
Capnocytophaga ochracea
NCBI taxonomy Id: 521097
Other names: C. ochracea DSM 7271, Capnocytophaga ochracea ATCC 27872, Capnocytophaga ochracea DSM 7271, Capnocytophaga ochracea str. DSM 7271, Capnocytophaga ochracea strain DSM 7271
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