Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Coch_0749PFAM: Peptidase M23; KEGG: gfo:GFO_3257 secreted peptidase, family M23. (422 aa)    
Predicted Functional Partners:
Coch_2182
Cell division protein FtsX; Required for cell division and gliding motility. Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
 
 
 
 0.907
Coch_2112
PFAM: cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin; KEGG: gfo:GFO_1639 N-acetylmuramoyl-L-alanine amidase.
 
 
 0.768
Coch_1660
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gfo:GFO_2544 ABC-type transporter ATP-binding protein.
 
 
 
 0.752
Coch_0750
KEGG: gfo:GFO_3258 conserved hypothetical protein, secreted.
 
     0.668
Coch_1941
PFAM: outer membrane efflux protein; KEGG: fjo:Fjoh_1671 outer membrane efflux protein.
  
    0.594
dut
Deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family.
       0.567
Coch_0215
KEGG: gfo:GFO_2766 FtsQ-like cell division protein.
  
   
 0.550
Coch_1396
PFAM: peptidase M48 Ste24p; KEGG: glo:Glov_0813 peptidase M48 Ste24p.
 
 
   0.513
Coch_1749
KEGG: sus:Acid_4617 hypothetical protein.
 
 
   0.506
Coch_1935
PFAM: peptidase M48 Ste24p; KEGG: fjo:Fjoh_2747 peptidase M48, Ste24p.
 
 
   0.506
Your Current Organism:
Capnocytophaga ochracea
NCBI taxonomy Id: 521097
Other names: C. ochracea DSM 7271, Capnocytophaga ochracea ATCC 27872, Capnocytophaga ochracea DSM 7271, Capnocytophaga ochracea str. DSM 7271, Capnocytophaga ochracea strain DSM 7271
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