Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Coch_0754PFAM: peptidase S9B dipeptidylpeptidase IV domain protein; peptidase S9 prolyl oligopeptidase active site domain protein; KEGG: fps:FP1112 Xaa-Pro dipeptidyl-peptidase. (724 aa)    
Predicted Functional Partners:
Coch_1768
Dipeptidyl-peptidase 7; Catalyzes the removal of dipeptides from the N-terminus of oligopeptides.
  
     0.596
Coch_0404
Dipeptidyl-peptidase 7; Catalyzes the removal of dipeptides from the N-terminus of oligopeptides.
  
     0.539
Coch_0485
PFAM: major facilitator superfamily MFS_1; KEGG: scl:sce7786 putative membrane protein/putative transporter.
 
    0.435
Coch_1438
PFAM: TGF-beta receptor type I/II extracellular region; major facilitator superfamily MFS_1; KEGG: gfo:GFO_2970 POT family amino acid/peptide transporter.
 
    0.410
Your Current Organism:
Capnocytophaga ochracea
NCBI taxonomy Id: 521097
Other names: C. ochracea DSM 7271, Capnocytophaga ochracea ATCC 27872, Capnocytophaga ochracea DSM 7271, Capnocytophaga ochracea str. DSM 7271, Capnocytophaga ochracea strain DSM 7271
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