Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Coch_0774PFAM: protein of unknown function DUF1239; KEGG: gfo:GFO_2978 hypothetical protein. (190 aa)    
Predicted Functional Partners:
Coch_0775
KEGG: gfo:GFO_2979 secreted protein containing tetratricopeptide repeats.
 
     0.921
Coch_0776
KEGG: gfo:GFO_2980 conserved hypothetical protein, secreted.
 
    0.854
coaX
Putative transcriptional acitvator, Baf family; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis.
       0.791
Coch_0772
KEGG: vha:VIBHAR_06129 uroporphyrinogen decarboxylase.
 
     0.776
Coch_0356
PFAM: Colicin V production protein; KEGG: gfo:GFO_3421 colicin V production protein.
 
    0.765
Coch_0326
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: fjo:Fjoh_0213 TPR repeat-containing protein.
 
    0.750
Coch_0773
KEGG: gfo:GFO_2977 membrane protein.
       0.746
Coch_1460
KEGG: fps:FP1615 hypothetical protein.
  
     0.710
Coch_1461
KEGG: fjo:Fjoh_2111 hypothetical protein.
 
    0.698
Coch_1775
KEGG: fjo:Fjoh_0264 hypothetical protein.
  
     0.688
Your Current Organism:
Capnocytophaga ochracea
NCBI taxonomy Id: 521097
Other names: C. ochracea DSM 7271, Capnocytophaga ochracea ATCC 27872, Capnocytophaga ochracea DSM 7271, Capnocytophaga ochracea str. DSM 7271, Capnocytophaga ochracea strain DSM 7271
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