Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Coch_0776KEGG: gfo:GFO_2980 conserved hypothetical protein, secreted. (426 aa)    
Predicted Functional Partners:
Coch_1357
TIGRFAM: outer membrane protein assembly complex, YaeT protein; PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: fps:FP2096 outer membrane protein precursor.
  
 
 
 0.954
Coch_1502
TIGRFAM: outer membrane assembly lipoprotein YfiO; KEGG: fjo:Fjoh_3469 DNA uptake lipoprotein-like protein.
 
 
 
 0.932
Coch_0775
KEGG: gfo:GFO_2979 secreted protein containing tetratricopeptide repeats.
 
     0.861
Coch_0774
PFAM: protein of unknown function DUF1239; KEGG: gfo:GFO_2978 hypothetical protein.
 
    0.854
Coch_1505
KEGG: gfo:GFO_3546 hypothetical protein.
 
 
   0.842
coaX
Putative transcriptional acitvator, Baf family; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis.
       0.816
Coch_0452
PFAM: surface antigen (D15); KEGG: gfo:GFO_0385 conserved hypothetical protein, secreted.
  
 
 
 0.789
Coch_0509
KEGG: fjo:Fjoh_0663 hypothetical protein.
  
    0.752
Coch_0772
KEGG: vha:VIBHAR_06129 uroporphyrinogen decarboxylase.
       0.721
Coch_0773
KEGG: gfo:GFO_2977 membrane protein.
       0.721
Your Current Organism:
Capnocytophaga ochracea
NCBI taxonomy Id: 521097
Other names: C. ochracea DSM 7271, Capnocytophaga ochracea ATCC 27872, Capnocytophaga ochracea DSM 7271, Capnocytophaga ochracea str. DSM 7271, Capnocytophaga ochracea strain DSM 7271
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